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	<title>2020 &#8211; Kylberg.org</title>
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	<description>Art by Gustaf Kylberg</description>
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		<title>Prints of protein structures</title>
		<link>https://kylberg.org/2020/04/377/</link>
		
		<dc:creator><![CDATA[Gustaf]]></dc:creator>
		<pubDate>Wed, 15 Apr 2020 16:00:14 +0000</pubDate>
				<category><![CDATA[Artwork]]></category>
		<category><![CDATA[2020]]></category>
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		<guid isPermaLink="false">https://kylberg.org/?p=377</guid>

					<description><![CDATA[I have processed and printed a few protein structures, exploring shading using a pen plotter. The process is described further down. The prints are printed using an AxiDraw pen plotter with Pigma Micron Fineliner pens on 297 x 210 mm (A4), 220 g/m2 acid free paper from Daler Rowney. They are printed in 10 numbered &#8230; <p class="link-more"><a href="https://kylberg.org/2020/04/377/" class="more-link">Continue reading<span class="screen-reader-text"> "Prints of protein structures"</span></a></p>]]></description>
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<p>I have processed and printed a few protein structures, exploring shading using a pen plotter. The process is described further down.</p>



<figure class="wp-container-2 wp-block-gallery-1 wp-block-gallery columns-2 is-cropped"><ul class="blocks-gallery-grid"><li class="blocks-gallery-item"><figure><a href="https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-1024x682.jpg"><img fetchpriority="high" width="1024" height="682" src="https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-1024x682.jpg" alt="" data-id="378" data-link="https://kylberg.org/?attachment_id=378" class="wp-image-378" srcset="https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-1024x682.jpg 1024w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-300x200.jpg 300w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-768x512.jpg 768w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-1536x1024.jpg 1536w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154532_cr-2048x1365.jpg 2048w" sizes="(max-width: 767px) 89vw, (max-width: 1000px) 54vw, (max-width: 1071px) 543px, 580px" /></a></figure></li><li class="blocks-gallery-item"><figure><a href="https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-scaled.jpg"><img width="1024" height="683" src="https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-1024x683.jpg" alt="" data-id="379" data-full-url="https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-scaled.jpg" data-link="https://kylberg.org/?attachment_id=379" class="wp-image-379" srcset="https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-1024x683.jpg 1024w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-300x200.jpg 300w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-768x512.jpg 768w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-1536x1024.jpg 1536w, https://kylberg.org/wp-content/uploads/2020/04/20200415_154609_cr-2048x1365.jpg 2048w" sizes="(max-width: 767px) 89vw, (max-width: 1000px) 54vw, (max-width: 1071px) 543px, 580px" /></a></figure></li></ul></figure>



<p>The prints are printed using an AxiDraw pen plotter with Pigma Micron Fineliner pens on 297 x 210 mm (A4), 220 g/m<sup>2</sup> acid free paper from Daler Rowney. They are printed in 10 numbered copies each.  </p>



<p>The print titles are listed left to right.</p>



<figure class="wp-block-table"><table><thead><tr><th>Title</th><th class="has-text-align-center" data-align="center">Prints still available for purchase</th></tr></thead><tbody><tr><td> Serotonin receptor</td><td class="has-text-align-center" data-align="center">3 of 10</td></tr><tr><td> Green fluorescent protein</td><td class="has-text-align-center" data-align="center"> 6 of 10 </td></tr><tr><td> SARS-CoV-2 spike glycoprotein</td><td class="has-text-align-center" data-align="center"> 6 of 10 </td></tr><tr><td> Immunoglobulin G monoclonal antibody</td><td class="has-text-align-center" data-align="center"> 6 of 10 </td></tr></tbody></table></figure>



<h2>The process</h2>



<p>The protein structure data from the <a href="https://www.rcsb.org">Protein Data Bank</a> has been processed in <a href="https://pymol.org/2/">PyMOL</a>, exported to <a href="http://blender.org/">Blender 3D</a> for rendering and finally made into a shaded vector based line drawing in <a href="https://inkscape.org/">Inkscape</a> with the text added. The whole idea was to explore the use of hatching techniques to shade 3D renderings of the proteins. Turning the results into physical prints using an <a href="https://www.axidraw.com/">AxiDraw</a> pen plotter soon became too tempting to resist. For the larger proteins I decided to render the surface rather than the schematic structure.  </p>



<div class="wp-block-image"><figure class="aligncenter is-resized"><img src="https://kylberg.org/wp-content/uploads/2020/04/20200411_103347_fix-768x1024.jpg" alt="" class="wp-image-381" width="384" height="512" srcset="https://kylberg.org/wp-content/uploads/2020/04/20200411_103347_fix-768x1024.jpg 768w, https://kylberg.org/wp-content/uploads/2020/04/20200411_103347_fix-225x300.jpg 225w, https://kylberg.org/wp-content/uploads/2020/04/20200411_103347_fix-1152x1536.jpg 1152w, https://kylberg.org/wp-content/uploads/2020/04/20200411_103347_fix-1536x2048.jpg 1536w, https://kylberg.org/wp-content/uploads/2020/04/photo-of-pen-plotter-in-action.jpg 1920w" sizes="(max-width: 384px) 100vw, 384px" /><figcaption>A photo of the printing process.</figcaption></figure></div>
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